Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015844492.1_cds_XP_016509041.1_22004
CDS Infomation

[gene=LOC107826566] [db_xref=GeneID:107826566] [protein=phosphatidylinositol/phosphatidylcholine transfer protein SFH12-like] [protein_id=XP_016509041.1] [location=join(17818..17863,18719..18974,19421..19520,19615..19881,19985..20062,20179..20280,20366..20415,20527..20626,20749..20844,20929..21027,21265..21346,22033..22412,22708..22794)] [gbkey=CDS]
Sequence

ATGAGTGACAACAAATCAGGACCTCTTGAAAGACCACACAGGCCAAGTCTAGAAAAGATT
GACATGGACGAGGATGAGAGGAAGACTAGGCTTGGGTCAATCAAGAAAGCGGCAATTAAT
GCCTCCGCCAAGTTCAGGAATTCTCTAACAAAGAGGGGCCGCAGACACAGCAGAGTCATG
TCTGTTGGTTTTGAGGATGAACATGATGCAGAGGAATTAAAGGCAGTTGATGCTTTCCGT
CAAGCACTTATCCTTGACGAATTACTTCCCGCAAAACATGATGATTATCATTTGATGCTA
AGGTTCTTGAAAGCTAGGAAATTCGATATTGAGAAAACAAAGCAGATGTGGTCTGATATG
CTTCAGTGGAGGAGGGAATTTGGTGCAGACACCATAATGGAGGACTTTGACTTCAAGGAA
AAGGAACAAGTTCTAAAGTACTATCCACAAGGGCATCATGGAGTTGACAAGGAAGGCAGA
CCAGTTTACATTGAAAGAATTGGTCAAGTAGATTCTGTCAAACTATTGCAAGCCACGACA
ATGGAACGCTACCTCAAGTACCACGTACAGGAGTTCGAGAGGACCATTAATGAGAAAATG
CCAGCCTGCTCACTTGCAGCCAAAAGACACATTGACACAAGCACAACCATTCTGGATGTC
CAAGGAGTGGGACTTAAAAATTTCAACAAGTCAGCAAGGGATCTCATTCAACGCCTCCAG
GCTATTGACGGCAACAATTATCCTGAGAGTTTGTGCCGCATGTACATCATCAATGCTGGT
TCTGGATTCAGGCTCTTGTGGAACTCTGTCAAGTCGTTCCTTGACCCAAAGACCACCCAA
AAGATCCATGTTCTAGGCAATAAATACCAAAGCAAATTGCTTGAAGTAATTGATGCCAGC
GAATTACCAGAGTTCTTAGGGGGCACATGTACTTGTGCTGACAAAGGAGGATGCATGCTT
TCTGATAAAGGCCCGTGGAATGATCCAGAAATAATGAAGATGGTTCGCAATGGTGAGCAT
AAATGCTGCTCACACAAAATTGTGGTCTCATTTGATGAGAAGACTATCCCAGAGGATGAC
AATGCTAACACCAAGAATGTAAAGAAGAACACTTCCTTTAAAAAGGGAACCGACTCTCCC
AACGTTCAAAGGGATAATATGGCATATGGCCAGCTTTCCCCTGTTCGCGAGGAATTTGAT
ATCCCTATTGTGGACAAGGCTGTTGATGCAACTTGGCATAAAGTTGTAAAAGCTAACAAC
TTTGCCAATTCTAAAGATTTCTTCCCTGTGCACGATACTTGCAAGTCGCCCGAAGGATTT
AGCAACCCCGTATTCAGTGGAGTGATGACTTTAGTCATGGGAATTGTGACATTGGTTCGG
ATGACTAAAAACATGCCGAGAAAGCTTACAGATGCTACCCTCTTGGCTGGTTCTTTGTGT
AGTGCTGAAATTATTAAAGGACAGCCTCAGTTAAATGGACATGTCATCTCCACAAAAGAT
TATATTAGCATGATGAAACGCATGGAAGATCTTGAGGATAAGGTCATTACTCTTAGCCAT
AAACCTTCTTCTTTACCACCTGAGAAAGAGGAAATGCTTAACAATGCCATGAATCGGGTT
GATACTTTGGAGCAAGAGCTTTCTGCTACCAAGAAGGCTCTTGAAGAAGCTCTTGTTCGT
CAACAAGAGCTCATATCCGCCCTTGAGAAGAAAAAGAAGAAGAAGAAGTTCTTTGTTTTC
TAA

Peptide Sequence

PEP ID

XP_016509041.1
PEP Infomation

PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH12-like [Nicotiana tabacum]
Sequence

MSDNKSGPLERPHRPSLEKIDMDEDERKTRLGSIKKAAINASAKFRNSLTKRGRRHSRVM
SVGFEDEHDAEELKAVDAFRQALILDELLPAKHDDYHLMLRFLKARKFDIEKTKQMWSDM
LQWRREFGADTIMEDFDFKEKEQVLKYYPQGHHGVDKEGRPVYIERIGQVDSVKLLQATT
MERYLKYHVQEFERTINEKMPACSLAAKRHIDTSTTILDVQGVGLKNFNKSARDLIQRLQ
AIDGNNYPESLCRMYIINAGSGFRLLWNSVKSFLDPKTTQKIHVLGNKYQSKLLEVIDAS
ELPEFLGGTCTCADKGGCMLSDKGPWNDPEIMKMVRNGEHKCCSHKIVVSFDEKTIPEDD
NANTKNVKKNTSFKKGTDSPNVQRDNMAYGQLSPVREEFDIPIVDKAVDATWHKVVKANN
FANSKDFFPVHDTCKSPEGFSNPVFSGVMTLVMGIVTLVRMTKNMPRKLTDATLLAGSLC
SAEIIKGQPQLNGHVISTKDYISMMKRMEDLEDKVITLSHKPSSLPPEKEEMLNNAMNRV
DTLEQELSATKKALEEALVRQQELISALEKKKKKKKFFVF

Transcript Sequence

Gene sequence data has not been registered.